TerSynDB

Plant Name: C5YHI2
Terpene synthases genes
Entry C5YHI2
Entry NameTPS2_SORBI
Sequence Statusreviewed
Protein NameBeta-sesquiphellandrene synthase (SbTPS2) (EC 4.2.3.123)
Sequence Length545
Gene NameTPS2 Sb07g004485
OrganismSorghum bicolor (Sorghum) (Sorghum vulgare)
EC Number4.2.3.123
Protein FunctionFUNCTION: Sesquiterpene synthase converting farnesyl diphosphate into beta-sesquiphellandrene and six minor products, zingiberene, 7-epi-sesquithujene, sesquisabinene A, (E)-alpha-bergamotene, (E)-beta-farnesene and beta-bisabolene. Can also accept geranyl diphosphate as substrate, producing nine monoterpenes, with myrcene and limonene as the major products. {ECO:0000269|PubMed:21880075}.
PathwayPATHWAY: Secondary metabolite biosynthesis; terpenoid biosynthesis.
Protein Active Site
Reference21880075; 19189423
DomainDOMAIN: The Asp-Asp-Xaa-Xaa-Asp/Glu (DDXXD/E) motif is important for the catalytic activity, presumably through binding to Mg(2+). {ECO:0000250}.
MotifMOTIF 299 303 DDXXD motif.
Protein FamilyTerpene synthase family
Ensembl IDEES13422;EES14619;
Biocyc IDPF01397;PF03936;
Protein ExistenceEvidence at protein level
Subunit Structure
Gene Ontology Biological Process defense response [GO:0006952]; terpenoid biosynthetic process [GO:0016114]
Gene Ontology Cellular Componentcytoplasm [GO:0005737]
Gene Ontologycytoplasm [GO:0005737]; beta-sesquiphellandrene synthase activity [GO:0102887]; magnesium ion binding [GO:0000287]; terpene synthase activity [GO:0010333]; defense response [GO:0006952]; terpenoid biosynthetic process [GO:0016114]
Gene Ontology Molecular Function beta-sesquiphellandrene synthase activity [GO:0102887]; magnesium ion binding [GO:0000287]; terpene synthase activity [GO:0010333]
GO IDGO:0000287; GO:0005737; GO:0006952; GO:0010333; GO:0016114; GO:0102887
String Database
PDB
RefSeq
KEGG
InterProIPR008949;IPR034741;IPR001906;IPR036965;IPR005630;IPR008930;
Protein SequenceMALTPSVCSISDVQGLQKDRTFHPSLWGDFFLTYQPPTAPKHAYMAERAEVLKEEVRKMVKSANEIQNILDLILTLQRLGLDNHYENEINELLSFVHDSDYDDKDLNLVSLRFYLLRKHGYDVSSDVFKCFQDKEGNFVVKDTKSLLSLYNAAHLRIHGEEVLDEAIIFTRGKLESVLDSLETTLADEVTLALQTPLFRRVRILETRNYIPIYEKEVARNEVILEFAKLNFNLLQLLYCEELKMITLWWKQLNVETNLSFIRDRIVEMHFWMTGACSEKKYSLTRTITTKMTAYITILDDIMDTHSTTEEAMLLAEAIYRCEENAAELLPEYMKDFYLYLLKTFDSVKHELGPNRSFRVFYLKELLKILVRGYSQEIKWRDEHYVPETIDEHLEVSKATVGAFQVACSSFVGMGDIITKEILDWLLSYPKLLKSMTTFVRLSNDIASTKREQTGGHHASTVQCYMMQHGTTIHDACEKIKELTEDTWKDMMKLYLTPTEQPKVIIQTVLDFARTAEFMYKKTDAFTFSHTIKDTIALLFVEPTLV