TerSynDB

Plant Name: Q84LB2
Terpene synthases genes
Entry Q84LB2
Entry NameAFS1_MALDO
Sequence Statusreviewed
Protein Name(E,E)-alpha-farnesene synthase (MdASF1) (EC 4.2.3.46) (Prenyltransferase) (EC 2.5.1.-)
Sequence Length576
Gene NameAFS1 AFAR
OrganismMalus domestica (Apple) (Pyrus malus)
EC Number4.2.3.46; 2.5.1.-
Protein FunctionFUNCTION: Sesquiterpene synthase catalyzing the production of (E,E)-alpha-farnesene, the predominant terpene produced during storage of fruits. Produces all six isomers (E,E)-alpha-farnesene, (Z,E)-alpha-farnesene, (E,Z)-alpha-farnesene, (Z,Z)-alpha-farnesene, (E)-beta-farnesene and (Z)-beta-farnesene from a mix of isomeric forms of the farnesyl diphosphate precursor. Able to convert geranyl diphosphate to the monoterpenes (E)-beta-ocimene, linalool and beta-myrcene. Has also a prenyltransferase activity producing alpha-farnesene directly from geranyl diphosphate and isoprenyl diphosphate.
Pathway
Protein Active Site
Reference14740213; 17140613; 19181671
Domain
Motif
Protein FamilyTerpene synthase family, Tpsb subfamily
Ensembl ID
Biocyc IDPF01397;PF03936;
Protein ExistenceEvidence at protein level
Subunit StructureSUBUNIT: Monomer. {ECO:0000269|PubMed:17140613}.
Gene Ontology Biological Process metabolic process [GO:0008152]
Gene Ontology Cellular Componentcytoplasm [GO:0005737]
Gene Ontologycytoplasm [GO:0005737]; magnesium ion binding [GO:0000287]; terpene synthase activity [GO:0010333]; transferase activity [GO:0016740]; metabolic process [GO:0008152]
Gene Ontology Molecular Function magnesium ion binding [GO:0000287]; terpene synthase activity [GO:0010333]; transferase activity [GO:0016740]
GO IDGO:0000287; GO:0005737; GO:0008152; GO:0010333; GO:0016740
String Database
PDB
RefSeqNP_001280822.1;
KEGGmdm:103446592;
InterProIPR008949;IPR034741;IPR001906;IPR036965;IPR005630;IPR008930;
Protein SequenceMEFRVHLQADNEQKIFQNQMKPEPEASYLINQRRSANYKPNIWKNDFLDQSLISKYDGDEYRKLSEKLIEEVKIYISAETMDLVAKLELIDSVRKLGLANLFEKEIKEALDSIAAIESDNLGTRDDLYGTALHFKILRQHGYKVSQDIFGRFMDEKGTLENHHFAHLKGMLELFEASNLGFEGEDILDEAKASLTLALRDSGHICYPDSNLSRDVVHSLELPSHRRVQWFDVKWQINAYEKDICRVNATLLELAKLNFNVVQAQLQKNLREASRWWANLGIADNLKFARDRLVECFACAVGVAFEPEHSSFRICLTKVINLVLIIDDVYDIYGSEEELKHFTNAVDRWDSRETEQLPECMKMCFQVLYNTTCEIAREIEEENGWNQVLPQLTKVWADFCKALLVEAEWYNKSHIPTLEEYLRNGCISSSVSVLLVHSFFSITHEGTKEMADFLHKNEDLLYNISLIVRLNNDLGTSAAEQERGDSPSSIVCYMREVNASEETARKNIKGMIDNAWKKVNGKCFTTNQVPFLSSFMNNATNMARVAHSLYKDGDGFGDQEKGPRTHILSLLFQPLVN